CDS

Accession Number TCMCG051C35060
gbkey CDS
Protein Id XP_002317735.1
Location complement(join(3083511..3083588,3084945..3085236,3085920..3086101,3086333..3087235,3087314..3087400,3088034..3088117,3088231..3088284,3088471..3088605,3088771..3088866,3090173..3090442,3092218..3092307,3093791..3093850,3094080..3094146,3094313..3094404,3094770..3094871))
Gene LOC7485204
GeneID 7485204
Organism Populus trichocarpa

Protein

Length 863aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002317699.3
Definition nuclear pore complex protein NUP93A [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category D
Description Nuclear pore protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14309        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046931        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051292        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAGCGAACAGGACATGAGTAACTGGACTGATCTGCTTCACTCCTCTACTAAGCTTGTCGAACAAGCCGCTCCTTCTGCTCAGTTCCCTCCTCTTCAGAGAAACTTAGATCAATTAGAAGCATTATCAAAGAAACTCAAGGCGAAAACCATAAGAACTGAGGCTCCTTCGCAATCTATTGCCGCTACAAGGCTTCTTGCGCGTGAAGGGATAAATGCAGAGCAGCTTGCTCGAGATCTTAAGTCTTTTGAATTGAAGACAACATTTGAGGATGTGTTTCCTGCCGAGGCAACAAGTGTTGAAGAGTATCTACAACAGGTTCATGAAATGGCAATGGTATCAGCCATTCAGGAAGCTCAGAAGGATAACGTAAGAAGTTTTAATGATTACATGATGAAAGTTTTGGAGGAGGATTGGCAAAAGGAAAGACGTGACTTTCTTCAGAGCTTGAGCCGAATTTCATCATTACCCAAGACTAACTTAGCTGATACAAGCACTGGGGTTACTCGTTCTCGTCAAATAGCTTCTCTGGCTTCCAGCCCTCATGTTTCTTCTGGTTCATCTGGCATGGAAAATTTACCTTTAGCTAACAAATCCTTTGTGGAGAAAAAAGCCTCAGCATATGCTGAGGCTGTGAAGAATCTGAACCGTGCACGAGAGCATGGCTCACAGTTTAAACCTGCAACAGCCTTCAAGGGTGCTTATGAAAGCTTAGGTGCTGAAGTATCAGGTGGAAAATCTGTTAACATGCAAAAGATATGGCATCTTGTTCAGACATTGGTGGGTGAAAATACAACCATGAAACAGAGTATTTCAAGGAAAATGTCGTTAGTGATTGGTGCAAGGCGCCATCTTGAATGGGGCCATGAAAAATACATCATGGATACAATACAAAATCATCCTGCTCAGGCTGCTCTTGGTGGAGCTGTTGGGAATTTACAAAGAGTTCGTGCATTTCTCCGGATTCGATTAAGGGATTATGGAGTTCTGGATTTTGATGCTGGTGATACTCATAGGCAGCCTCCTGTTGATACCACTTGGCAGCAGATCTATTTTTGCTTGAGAACTGGGTACTATGAGGAAGCGAGAACTGTTGCCCTGTCTTCCCGTGCTTCACTCCAATTTGCTCCGATGCTCATGGAGTGGATTAACTCTGGAGGTATGGTGCCTGTGGACATTGCAGCTGCTGCTTCAGAAGAATGTGAGAAAATGTTAAGAATGGGTGATCGAGTGGGTCGAGCTGCATATGACAAGAAAAAGTTGTTGCTCTATGCTGTAGTATCTGGTTGCCGCTGGCAGATTGACCACCTGCTGAGAGATCTTCCAACCCTTTTCAATACTATAGAGGATTTTCTGTGGTTCAAATTATCAGCTGTACGAGATTACCCTGCTGGGACCTCGACTCTGGTCCTGAATGAAAGCTTGGTACCATACAGTTTGGAGGATTTGCAGGCATACTTGAATAAATTTGAGCCATCATATTACACAAAAAATGGGAAAGACCCTCTCGTGTACCCTTATGTATTACTTTTAAGTGTCCAGATGCTACCAGCTATCTTATACCTGTCTAGGGAAGCTGCAGATGAAGGATATGATATTGATGCAGTCCATATATCAATTGCACTAGCAGACCATGGGGTTCTTACTGAAGGTGGTGGAGCTGGGCAAAAACTCGGGGTAATGGATGCTTATGCAGAGGTCTCTAGCATAATTAGGCAGTATGGATCTGCATATTTACATCATGGAAATCTCTCAATGGCACTAGAATATTATGCCCAAGCTGCAGCCACAGTAGGTGGTGGAGAAACATCATGGACTGGGAGAGGTAATATTGATCAGCAGAGGCAGAGAAGCTTGATGTTGAAGCAGCTCCTCACTGAGCTTCTGCTAAGGGATGGTGGTATTTATTTTCTTCTGGGTCCAAGAGGTGCTGGAGAAGAAGGTGAATTGGCACGATTTTTGATCGATTTCCAAGCAAGACAACAATTTCTACTTGAAGCTGCTCGCAAGTGTCAAGAGGCTGGACTAGATGAAAAGTCTATAGAAATTCAGAAGAGAGTTGGGGCATTTGCCATGGCTTTAGATACAATCAACAAGTCCCTGTCAGAAGCAATTTGTGCGCTATCTCGTGGTAGATTGGATGGTGAGAGCCGAACTGCTGGTCTCATTAATTCTGGCAATGAGATTCTCGTGACCTTTAAGTATTATCCTGATTTCAGTTTTCAAGAAAGAGACCTTGTCCTAGAGCAAGAAACCGTGTTGAGGCAGCTTGAGGCGATATTATCTGTTCTCAAGTTGGCAAGACTGGGTCATTTTCTTGATGCTTTAAGGGAGCTTGCCAAACTTCCTTTTCTTCCATTGGATCCACGAGTGCCAGATATCACTGTTGATGTTCTTCAGAATTTATCCCCTCGTGTTCAGGATTGTGTGCCAGACCTTTTGAAGGTTGCTTTAACATGTTTGGATAATGTGACAGATTCTGATGGATCACTTCGTGCCATGAAAGCAAAGATTACACAGTTTATTGCAAACAATATGAGTCGGAACTGGCCTCGAGATTTGTATGAGAAGGTTGCTCGAAGTTTGTGA
Protein:  
MGSEQDMSNWTDLLHSSTKLVEQAAPSAQFPPLQRNLDQLEALSKKLKAKTIRTEAPSQSIAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQKDNVRSFNDYMMKVLEEDWQKERRDFLQSLSRISSLPKTNLADTSTGVTRSRQIASLASSPHVSSGSSGMENLPLANKSFVEKKASAYAEAVKNLNRAREHGSQFKPATAFKGAYESLGAEVSGGKSVNMQKIWHLVQTLVGENTTMKQSISRKMSLVIGARRHLEWGHEKYIMDTIQNHPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDTHRQPPVDTTWQQIYFCLRTGYYEEARTVALSSRASLQFAPMLMEWINSGGMVPVDIAAAASEECEKMLRMGDRVGRAAYDKKKLLLYAVVSGCRWQIDHLLRDLPTLFNTIEDFLWFKLSAVRDYPAGTSTLVLNESLVPYSLEDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSVQMLPAILYLSREAADEGYDIDAVHISIALADHGVLTEGGGAGQKLGVMDAYAEVSSIIRQYGSAYLHHGNLSMALEYYAQAAATVGGGETSWTGRGNIDQQRQRSLMLKQLLTELLLRDGGIYFLLGPRGAGEEGELARFLIDFQARQQFLLEAARKCQEAGLDEKSIEIQKRVGAFAMALDTINKSLSEAICALSRGRLDGESRTAGLINSGNEILVTFKYYPDFSFQERDLVLEQETVLRQLEAILSVLKLARLGHFLDALRELAKLPFLPLDPRVPDITVDVLQNLSPRVQDCVPDLLKVALTCLDNVTDSDGSLRAMKAKITQFIANNMSRNWPRDLYEKVARSL